Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSAHSQLEQQLQQIKKAKITAETDADQTRRKQNEQDWLEEDSNQLTQEKRVLLDFLRSGWQGEEASSFHRYLEEQQHEESQVWRRDLQDKRSDLDTELQENKDRLHTLEAKQATLQKEWSQ |
3GWK Chain:C ((17-58)) | --------------------------------AQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFN------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 608 for 175 contacts (3.5/contact) +
2D Compatibility (PS) -4372 + (NN) -2363 + (LL) 6736
1D Compatibility (HY) 0 + (ID) 200
Total energy: 409.0 ( 2.34 by residue)
QMean score : 0.595
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