Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIKKYEPLNLYTNFKKSAERYPEMPIHFDEELVTFPELGLHSTYKKCEEAIIQKAAHLH-KFGVRKEEKVIVYKSAKFDSYILAVAISYIGAVPIMVSPHLPASTIDIFVNRLDQPWLLFDSETSDKSH---------QLNNLPDSRL--INA-------------EQLF--KAPLD-GYTCEQEELPKDMIAYMTHTSGTTGVPKLIAHSANSMGWRTKY-QRRILNFIKPRGLVAFHISPVHSRFN-IGVSSLMSLGFPLLPIAN----PSKANVEKVLREYKPYVLETHPNHFVQWASLARE--KPDVFQSIKFYHSTFDAINKETMAVFLRTSEYKKPLFLQIYGQSECGPMILRGHTLQSIETLNARDMGIGVPGLTEVRIVDQDG-NPV-PAGVSGNIQMLS--KGRALTYYKEEARFEENVY---GPWWDSGDYGMKDEKGRLFLQDRQVDLVETIDS---TLAIEDKLLDTLTFLDEVVIIRGEN--GSPQ--PIIAVHNDGEMNWDAWWK----AV-SDLPHMNEP-MVMKYDEIPRTATMKVQRLQMERELKK |
| 1RY2 Chain:A ((83-649)) | ---------ACYNCVDRHALKTPNKKAIIFEGDE--PGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITLLAISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSVAFHAPRDLDWATEKKKYKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTF-DTHQEDVFFTAGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDSYIENHSLKSLRCLGSVGEPIAAEVWEWYSEKIGKNEIPIVDTYWQTESGSHLVTPLAGGVTP-MKPGSASFPFF-GIDAVVLDPNTGEELNTSHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNPYPGYYFTGDGAAKDKDGYIWILGRVDDVVNVSGHRLSTAEIEAAIIE-DPIVAECAVVGFNDDLTGQAVAAFVVLK------LQDIKKHLVFTVRKDIGPFAAPKLIILVDDLPKTRSGKIMRRILRKILA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209100 for 4099 contacts (-51.0/contact) +
2D Compatibility (PS) -51312 + (NN) -13624 + (LL) 828
1D Compatibility (HY) -18800 + (ID) 4250
Total energy: -296258.0 ( -72.28 by residue)
QMean score : 0.428
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