Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VTEKTIRLTTAQALVKFLNQQYIEVDDEMAPFVDGIFTVFGHGNVVGIGQALEEDPGHLNVYQGKNEQGMAHAAIAYAKQKNRKRIYACSASAGPGSANLITAASTALANNLPVLFLPADTFATRQPDPVLQQLEHESSAAITTNDGFQAVSRYFDRVQRPEQLMSALIRAFEVMTNPASAGPATICIAQDTEGEAFDYPVEFFQKRIHYLNRQIPTKRELTEAARLIQASKTPVIIVGGGARY-SDAREELIALSEQSNIPLVETHAGKSTVEFDFKNNLGGTGILGTLAANKAIRDADLVIGIGTRYTDFTTSSKTAFGP---------ATKFININVSRMQTYKLD-A-FQVVGDAKATLAELAPLLKGYQTQFGDRIAVYKAEWLAERTRLQNTKFNREAFTPEIKDQFDQATLNEYADSLQTEFTQTEALITINDTVAP---DSIVVCSAGSLPGDLQRLWNPAVPNTYHLEYGYSCMGYEINGALGAKMAAANNQEVYSIVGDGSFCMSHSELLTSLQYGKKINIMLFDNSGFGCINNLQMANGSDSFFCEFRDSDNQIMQVDYAKIAEGYGAKVYRANTKEDLISALEDAKKQTKTTLIDMKVLPKTMSEGYLNWWNVGVSEVSNKESIKQAYEEKQTNLKNARLY |
1T9B Chain:A ((77-642)) | --TSFVGLTGGQIFNEMMSRQN----------VDTVFGYPGG-AILPVYDAIHNS-DKFNFVLPKHEQGAGHMAEGYARASG--KPGVVLVTSGPGATNVVTPMADAFADGIPMVVFTGQVPTSAIGTDAFQE--------ADVVGISRSCTKWNVMVKSVEELPLRINEAFEIATS-GRPGPVLVDLPKDVTAAILRNPIP-------------FVMQSINKAADLINLAKKPVLYVGAGILNHADGPRLLKELSDRAQIPVTTTLQGLGSFDQEDPKSLDMLGMHGCATANLAVQNADLIIAVGARFDDRVTGNISKFAPEARRAAAEGRGGIIHFEVSPKNINKVVQTQIAVEGDATTNLGKMMSKIFPVKER---------SEWFAQINKWKKEYP-Y--------------AYM--EETPGSKIKPQTVIKKLSKVANDTGRHVIVTTGVGQHQMWAAQHWTWRNPHTFITSGGLGTMGYGLPAAIGAQVAKP-ESLVIDIDGDASFNMTLTELSSAVQAGTPVKILILNNEEQGMVTQWQS----LFYEHRYSHTH--QLNPDFIKLAEAMGLKGLRVKKQEELDAKLKEFVSTKGPVLLEVEVDKKVPVL------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219252 for 4975 contacts (-44.1/contact) +
2D Compatibility (PS) -57839 + (NN) -25019 + (LL) 6888
1D Compatibility (HY) -23600 + (ID) 6300
Total energy: -325122.0 ( -65.35 by residue)
QMean score : 0.441
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