Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVFAEYLAEIEN-PDHRARTQEVLTWVAETFPDLKPEIKWNTPMFTNNGTFIIGFSIAKQHMSVSPEVAGIERFEADIKEAGYSHTKGIFRITWAKSVDYDLLAKIIKFNIQDKANYTSFWRV
2I8D Chain:A ((3-123))
-GSLAEWYQRIPTPD-DLTRVESLFANMQAQFPQLKLEFKWNQPMFTDHGTFIMGFNPSKKHLAVAIEPQTMTRFIPQIDKAGYDH-SQIIRFPWHKPLDEQLIHDLIAYTIDQKKDATTFWQR
General information:
TITO was launched using:
RESULT:
Template:
2I8D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21638 for 617 contacts (-35.1/contact) +
2D Compatibility (PS) -12815 + (NN) -3984 + (LL) 184
1D Compatibility (HY) -11600 + (ID) 2250
Total energy: -52103.0 ( -84.45 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_2I8D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I8D-query.scw
PDB file :
Tito_Scwrl_2I8D.pdb
: