Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIKNKVIIITGASSGIGKATALLLAEKGAKLVLAARRVEKLEKIVQTIKANSGEAIFAKTDVTKREDNKKLVELAIERYGKVDAIFLNAGIMPNSPLSALKEDEWEQMIDINIKGVLNGIAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWAVRDLMEVLRMESAQEGTNIRTVTIYPAAINTELLETITDKETEQGMTSLYKQYG--ITPDRIASIVAYAIDQPEDVNVNEFTVGPTSQPW
3P19 Chain:D ((17-251))
-----KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL------NLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVA--ASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNVCIREIALAPTKQ--
General information:
TITO was launched using:
RESULT:
Template:
3P19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136029 for 1991 contacts (-68.3/contact) +
2D Compatibility (PS) -25573 + (NN) -11837 + (LL) 1464
1D Compatibility (HY) -16800 + (ID) 4650
Total energy: -193425.0 ( -97.15 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_3P19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P19-query.scw
PDB file :
Tito_Scwrl_3P19.pdb
: