Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKGLKKMKYSIQFSDAIHILAYIEIFKNTNLLSSEIIAGSVKTNPANIRRIMSNLKKANLITTQTGKAN-PILTKPPEEISLLDVYKSIEGNTNLIHVDPKTNPDCIVGANIQQVLSSKYELLQQKIELEMDEIKLDSIIHDISVLESKDRPQNNEFITKFL
3LWF Chain:A ((17-153))
---FQGMKITTKGRYGLTITLELAKRIGDGPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTLEGPIVLV------E--SME--DEEAAQRELWTRMRNAVRDVLDQTTLSDLLKHSTDSELTD------------
General information:
TITO was launched using:
RESULT:
Template:
3LWF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75389 for 880 contacts (-85.7/contact) +
2D Compatibility (PS) -14413 + (NN) -3178 + (LL) 744
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -96486.0 ( -109.64 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_3LWF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LWF-query.scw
PDB file :
Tito_Scwrl_3LWF.pdb
: