Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------VKKLVAWFNG----LSKMWKVVVII--GAVFVVIIALT-TGEDEGEQ-TKTKKDSNKVVKTASRPKLSTKDLALIKADLAEFEARE-LSSEKILK-DTIKEES---------WSDLDF-ANDNINQMIGT--MKRYQQE-ILSIDAIKRSSEA----SADTEAFKKIFKEWSEFKIER----IQVTIDLLNGKKD------SEAVFKKTYPNQIIFKKVRTNKLQTALNNLKVGYELLDSQK- |
| 4RPC Chain:A ((12-261)) | KLHRMGEPHGPKVLLIHGAGFYWQTCFARIIRDLKDRYCLLIPELEGHTAHPREYMVSVEETAGKLGEALEELR-VDKVQAIYGVSLGASVAVEMAIRGEIKVMNLLLDGGQYEGMGEMTEQYANIMADAFLNLLAGEHLPSPVKENMGFAANNDVEVLQPLIYEHITREALLHALLAAYRYDLKAKNARVDARVSVLIGGNEIYGAQFTPLLAEISRHPLDIYEFPNRGHAEVLSKEPEKISRLIREILN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RPC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22596 for 1567 contacts (14.4/contact) +
2D Compatibility (PS) -21369 + (NN) -2971 + (LL) 176
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -5818.0 ( -3.71 by residue)
QMean score : 0.309
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