Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MTTIFPKEQNVTPLFEQILANPTACRRFKDVFLDNLESYQET-----RGFEKDDTLFAKIILSAYR----QSDVSALLLG-------------------------VCGRTLFELLRQAFLIPKKLTVDNPFFLTDKEGNFIA-KKDDISNREQEKFQEIYQSDLHHSETTIFLVDDDDIVHSYEP----DFSISTKRINKKRG--ILVLYSLPDTLKSGMTESEVYA--FIWKTFL---HIQEIIPSSR---IFYGQETSENADELGVFL-------PIHHFEKKMLQNIEQ-------------VNELVDALREQMVNK |
| 1LAM Chain:? ((160-484)) | FASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYKGSPNASEPPLVFVGKGITFDSGGISIKAAANMDLMRADMGGAATICSAIVSAAKLDLPINIVGLAPLCENMPSGKANKPGDVVRARNGKTIQVDNTD---AEGRLILADALCYAHTFNPKVIINAATLTGAMDIALGSGATGVFTNSSWLWNKLFEASIETGDRVWRMPLFEHYTRQVIDCQLADVNNIGKYRSAGACTAAAFLKEFVTHPKWAHLDIAGVMTNKDEVPYLRKGMAGRPTRTLIEFLFRFSQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39792 for 1986 contacts (-20.0/contact) +
2D Compatibility (PS) -25510 + (NN) -112 + (LL) 248
1D Compatibility (HY) -1600 + (ID) 2000
Total energy: -68766.0 ( -34.63 by residue)
QMean score : 0.202
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