Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATQKNLVDLA-TKAYIYGFPFIFNTQQIERYVTVGIGGTKQVPFNNFTHASRLAEP--------SDKFVSVNNDTIYSNAPIDVSAGP------------------VVLSVPDTSGRYYVLQFVDAWSNNFAYVGKRATGTSAGKFL--------------------LTPPNWNGDVPADMIEIKFPTNIGIIIGRLACDGEADLPTVRELQEQLKITPLNEGKEVDGFPEYDRSLGKELAFFEQLRVYMAQFPPAERDLVKQESFAPIGLMEKGVSPYSNPSEELKNALIEGAKAGLANIKKATTNF--KSENGWGLTQHLFDYNADFFEIGT--KKSLDWVIED-----REEAYIIRAVSAITALWGNHGYEAVYLMTWTDTDGNALNGKNKYTLELNPIPPV----DSFWSITMYDLPE--YFLCENPINRYSIGDRTPGIQYNDDGGITIVVSKDEPTDPKERANWLPA------------PDAEFRPMFRLYNPQQPLVDGSYHFPGFEKK |
| 1Y8Q Chain:B ((6-550)) | GLPRELAEAVAGGRVLVVGAG-GIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKKGVTECYECHPKPTQRTFPGATIRNTPSEPIHCIVWAKYLFNQLFGEEDADQEVSPDRADPEAAWETKEWAKSTGYDPVKLFTKLFKDDIRYLLTMDKLWRKRKPPVPLDWAEVQSQL----GLKDQQVLDVKSYARLFSKSIETLRVHLAEKGDGAELIWDKDDPSAMDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNAVIAGLIVLEGLKILSGKIDQCRTIFLNKQPNPRKKLLVPCALDPPNPNCYVCASKPEVTVRLNVHKVTVLTLQDKIVKEKFAMVAPDVQIEDGKGTILISSEEGETEANNHKKLSEFGIRNGSRLQADDFLQDYTLLINILHSEDLGKDVEFEVVGDA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17911 for 3209 contacts (-5.6/contact) +
2D Compatibility (PS) -45504 + (NN) -9866 + (LL) 600
1D Compatibility (HY) -1200 + (ID) 2150
Total energy: -76031.0 ( -23.69 by residue)
QMean score : 0.254
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