Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METNQILETIRMIEEEKLDIRTITMGISLLDCMDGDGEAARKKIYQKIVTKARNLVAVGEAIESEFGIPIINKRISVTPIAIIAGSSADTDYVEFAKTLDAAAKEVGVNFIGGYSALV----QKGYTKGDEILIRSIPQALAQTERVCSSVNVGSTRTGINMDAVRQMGEVIKETADLTADTQGLGCAKLVVFANAVEDNPFMAGAFHGVGEADCVINVGVSGPGVVKRAIEKVKGEPFDIVAETVKQTAFKITRMGQLVGQVASEKLGVPFGIVDLSLAPTPAIGDSVAHILEEMGLEMVGTHGTTAALALLNDAVKKGGVMACGHVGGLSGAFIPVSEDAGMIEAVQQGALNLEKLEAMTAICSVGLDMIAVPGDTTAETLAAMIADEAAIGVINNKTTAVRVIPASGTKVGDMVEFGGLLGTAPVMPVNGKSSVDFIARGGRIPAPIHSFKN |
| 1QOY Chain:A ((-4-298)) | ------------SMAEIVADKTVEVVKNAIETADGALDLYNKYLDQVI--PWQTFDETIKELSRFKQEYSQAASVLVGDIKTLLMDSQD-KYFEATQTVYEWCGVA-TQLLAAYILLFDEYNEKKASAQKDILIKVLDDGITKLNEAQKSLLVSSQSFNNASGKLLALDSQLTNDF--------------------------------------------------------SEKSSYFQSQVDKIRKEAYAGAAAGVVVG---------PFGL------------------------------------------------------------IISYSIAAGVVEGKLIPELK-NKLKSVQNFFTTLSNTVKQANKDIDAAKLKLTTEIAAIGEIKTETETTRFYVDY-----DDLMLSLLKEAAKKMI---NTCNEYQKRHGKKTLF------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QOY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4641 for 2218 contacts (-2.1/contact) +
2D Compatibility (PS) -30073 + (NN) 4663 + (LL) 9228
1D Compatibility (HY) 11600 + (ID) 1200
Total energy: -10423.0 ( -4.70 by residue)
QMean score : 0.183
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