Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDGEKETSKLLHELKKATNLRQVLDENEAEFKSSEMVTYLKELLAEKKLTKASVIRAARLHETYGYQIFSGVRRPSRDRTIALSFGFKLSGLEASRLLKYTEYPPLYAKNRRDAIIIFALDHGYTLDQTNDSLYDLEEALIETYKEEKPLI
3IVP Chain:A ((9-71))
-------------------------------DFRALGLAIKEARKKQGLTREQVGAMIEIDPRYLTNIENKGQHPSLQVLYDLVSLLNVSVDEF---------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IVP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20025 for 435 contacts (-46.0/contact) +
2D Compatibility (PS) -6559 + (NN) -268 + (LL) 6664
1D Compatibility (HY) -400 + (ID) 600
Total energy: -21188.0 ( -48.71 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_3IVP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IVP-query.scw
PDB file :
Tito_Scwrl_3IVP.pdb
: