Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRSWPDFAAFLLTILTVTWIILTWGLHISDIVPGGEKGIWYKLIPLFLGIISTISVFFVKEKLVKWILLGFNILLLILIYFVYHIGEIGMF
1RH5 Chain:C ((21-52))
----------------------------------------------------ETFSKIRVKPEHVIGVTVAFVIIEAILTYGRF--------
General information:
TITO was launched using:
RESULT:
Template:
1RH5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12491 for 114 contacts (-109.6/contact) +
2D Compatibility (PS) -3437 + (NN) -2126 + (LL) 4948
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -14806.0 ( -129.88 by residue)
QMean score : 0.191
(partial model without unconserved sides chains):
PDB file :
Tito_1RH5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RH5-query.scw
PDB file :
Tito_Scwrl_1RH5.pdb
: