Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKAKYEENFKKSLVALYRRGKTKHSICQEFNVPHSTFGKWIKKFNNEENIESNEILNILQAQELKKQRVLLEEELSILTEAIAVFENPLPKNK
1U78 Chain:A ((5-51))
---SALSDTERAQLDVMKLLNVSLHEMSRKISRSRHCIRVYLKDPVS-YGT-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1U78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18184 for 279 contacts (-65.2/contact) +
2D Compatibility (PS) -4855 + (NN) -1138 + (LL) 4636
1D Compatibility (HY) -400 + (ID) 150
Total energy: -20091.0 ( -72.01 by residue)
QMean score : 0.781
(partial model without unconserved sides chains):
PDB file :
Tito_1U78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U78-query.scw
PDB file :
Tito_Scwrl_1U78.pdb
: