Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNWQQKWESWRDMTAAMQQEIKIE-AAEKVTSYIKNDQFEEAINVIRQTENLLNELDFETKMNRVEEQLQAFTSDQEAAKSFEASQLQNIEKPSTKVSFDLSHVKSEAINQFTKRDFNLVDSNDTHMQFLKGNRNFYMDIFNPEESEEYHYANLDEKCQYKNIGFICQNDAAAEI-ATKLTNEWLETLEAPKKKFLTVNIANLNAMKQNPEVLFQ- |
1K8K Chain:F ((2-167)) | -------TATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTIS--------------RNEKEKVLIEGS------INSVRVSIAVKQ-ADEIEKILCHKFMRFMMMRAENFFILR-----------------------RKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17677 for 1104 contacts (16.0/contact) +
2D Compatibility (PS) -17100 + (NN) -1522 + (LL) 3836
1D Compatibility (HY) -10800 + (ID) 1150
Total energy: -9059.0 ( -8.21 by residue)
QMean score : 0.228
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