Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGINTDTENISELLKTYWSIQRISAGYADQNAASLGLTIQQLAMINVIYSTPGISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKLSKKGEDLSKRSTANAFMYKAMMKVFENLTENEIEELIRLNKKVETLLKKSK
3BJ6 Chain:A ((8-147))
-------TDQLYQAVQATRPLLRNITAAVERGTLREGVTVGQRAILEGLSLTPGATAPQLGAALQMKRQYISRILQEVQRAGLIERRT--NPEHARSHRYWLTPRGEAIITAIRAD--EMAKLALFSEGFSSVELTAYHKVQLALTRFFAD--
General information:
TITO was launched using:
RESULT:
Template:
3BJ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58386 for 880 contacts (-66.3/contact) +
2D Compatibility (PS) -15111 + (NN) -6268 + (LL) 756
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -82009.0 ( -93.19 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_3BJ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BJ6-query.scw
PDB file :
Tito_Scwrl_3BJ6.pdb
: