Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VNPAYFVLLVEELKTKYLVKDICQILQVPLSTYYRWKKKDFSQSSLEKKIGQLCKAYQFTYGYRKIAALMKQE--EQVGINKVQRIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRNFQASQPLEKLTTDITY-LYFGDCRLYLSSIMDLYNGEIVAYSIGEKQDTELVLDTLNQLS--LPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA |
| 3OYM Chain:A ((55-273)) | --------------------------------------------SDRQKIVLQAHN-LAHTGREATLLKIANLYWWPNMRKDVVKQLGRCQQCLITNASNKASG---------PILRPDRPQKPFDKFFIDYIGPLPPSQGYLYVLVVVDGMTGFTWLYPTKA-PSTSATVKSL-NVLTSIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKHSDIKRLLTKLLV---GRPTKWYDLLPVVQLALNN-TYSPVLK-YTPHQLLF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31323 for 1488 contacts (-21.1/contact) +
2D Compatibility (PS) -22419 + (NN) -6380 + (LL) 5236
1D Compatibility (HY) -800 + (ID) 1800
Total energy: -57486.0 ( -38.63 by residue)
QMean score : 0.258
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