Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDDKLQKKLTLLPESPGCYIYRDENNEILYIGKSKCLKNRVKSYFHSK------QIG-KTARLVRQI---RDLELIITTSE-------------KEALLLEMILIQKYQPPFNIQLKEGTSYPYIKITNEKNPHIEVVFEVKRDGAHYFGPYPGRFSARQTVDLIEKLFPLCRCDGKPGRPCLYYHLGLCLGPCQAEIEPAVYKKQIHKISRFLEGDVKNVKDKLLGDMLTATENLEFERAAELRDKIHAINETIEKQHIIFPGLKNRDIIGCYEQDNYLSVFVFFVRNGAINGSKWHVFQVEKTLQEELATFLNQFYEDPNNIQPKELLIAEKIDKSLLNEPLRKACLFPQKGSKKKQVDLAIENAKSAYIAYAKMKEYDFEIQLNNH |
| 2WSH Chain:A ((34-139)) | ---------LSIPNKYNVIYAIAINDELVYIGKTKNLRKRINYYRTAINRKDKTSDSTKSALIHSALKEGSKVEFYARQCFNLSMTNELGTMTIATIDLEAPLFIKLFNPPWNIQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4547 for 544 contacts (-8.4/contact) +
2D Compatibility (PS) -8642 + (NN) -2056 + (LL) 19476
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -2019.0 ( -3.71 by residue)
QMean score : 0.549
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