Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDNNQKDLNQVIRQLKEKGIVVEKTKSRKDIWKSVSSKAMPNMTLRLQ
1M5W Chain:A ((111-132))
--GQRDKMRDACKRLADAGIQVSL------------------------
General information:
TITO was launched using:
RESULT:
Template:
1M5W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9 for 87 contacts (0.1/contact) +
2D Compatibility (PS) -2429 + (NN) -979 + (LL) 1836
1D Compatibility (HY) -1200 + (ID) 200
Total energy: -2963.0 ( -34.06 by residue)
QMean score : 0.814
(partial model without unconserved sides chains):
PDB file :
Tito_1M5W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M5W-query.scw
PDB file :
Tito_Scwrl_1M5W.pdb
: