Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIEKISFSLISLAGDSFSKLIEALQAAKESDSELVEQLLKEADDLMIEAHKVQTEMLIQETRGEQANFSVLLVHAQDTLMNTILASTLIREMIEMHQEIKTLRKEEEK
3L8R Chain:A ((4-102))
EELQVAAFEIILNSGNARSIVHEAFDAMREKNYILAEQKLQEANDELLKAHQAQTDLLQEYASGTEIKIEIIMVHAQDHLMTTMTLREVAIEMLELYKK----------
General information:
TITO was launched using:
RESULT:
Template:
3L8R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34857 for 699 contacts (-49.9/contact) +
2D Compatibility (PS) -11183 + (NN) -10536 + (LL) 1036
1D Compatibility (HY) -4800 + (ID) 1600
Total energy: -61940.0 ( -88.61 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_3L8R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L8R-query.scw
PDB file :
Tito_Scwrl_3L8R.pdb
: