Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYFIDNNNEKDPRINLAVEEFILTELNL-DEPVLLFYINKPSIIIGRNQNTVEEIDTEYVEKNDVIVVRRLSGGGAVYHDEGNLNFSFI-TEDDGESFHNFAKFTQPIVEALKRLGVNAE----------LKGRNDLLIDGFKVSGNAQFATKGKMFSHGTLMYDLNLDNVAASLKPRKDKIESKGIKSVRSRVANISDFMDQEMTTEEFRDLLLLYIFGVEKVEDVKEYKLTAADWEKIHEISAKRYGNWDWNYGKSPKFDLTRTKRFPVGAVDVRLNVQKGVITDIKIFGDFFGVKNVADIEEKLVNTTYKREVLAEALVDIDVKEYFGNITKDEFLDLLY
2C8M Chain:D ((15-255))------------RMSLAYDEAIYRSFQYGDKPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLK--------------RERVANVTDFVD--VSIDEVRNALIRGFSETLHI-DFREDTITEKEESLARELFDKKYSTEEWNMG---------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2C8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106748 for 1734 contacts (-61.6/contact) +
2D Compatibility (PS) -23023 + (NN) -6620 + (LL) 7660
1D Compatibility (HY) -16400 + (ID) 3800
Total energy: -148931.0 ( -85.89 by residue)
QMean score : 0.563

(partial model without unconserved sides chains):
PDB file : Tito_2C8M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2C8M-query.scw
PDB file : Tito_Scwrl_2C8M.pdb: