Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQAIDAILGHYSVRKFEDKDLTEEALTLLIKSAQAASTSSFVQAYSIIGITDKDIREQISAIAGNQPYTVQTGQLFIFVADLARHHAILEE-HQVDTAALETSEKWLVSVIDAALAAQNMAIAAESLGLGICFIGGIRNDVEQIAEILDLPPYTMPLFGLTIGHPVANKEKAKPRLPQDLVYHENSYKKM--NPETLAEYDKQIKTYYNERTAGKRVEGWSEQIARGLGRPSRLDLKAFLEKQHLNQK
1ZCH Chain:A ((1-248))
MNEVIKSLTDHRSIRSYTDEPVAQEQLDQIIEAVQSAPSSINGQQVTVITVQDKERKKKISELAGGQPWIDQAPVFLLFCADFNRAKIALEDLHDFKMEITNGLESVLVGAVDAGIALGTATAAAESLGLGTVPIGAVRGNPQELIELLELPKYVFPLSGLVIGHPADR-SAKKPRLPQEAVNHQETYLNQDELTSHIQAYDEQMSEYMNKRTNGKETRNWSQSIASYYERLYYPHIREMLEKQGFKVE
General information:
TITO was launched using:
RESULT:
Template:
1ZCH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110723 for 1808 contacts (-61.2/contact) +
2D Compatibility (PS) -27234 + (NN) -15843 + (LL) 64
1D Compatibility (HY) -14400 + (ID) 4400
Total energy: -172536.0 ( -95.43 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_1ZCH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZCH-query.scw
PDB file :
Tito_Scwrl_1ZCH.pdb
: