Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRAILIGVLIILLIAMILIVLLPAILAMVGAVLGFWSLKKLLEARSVGEKVIYGVLIGVGALIILANLKGILVVVIIGAIIYFLTRNKNKPRKNDDVFDYPYNK
2K5R Chain:A ((1-97))
MDRKLLHLLCSPDTRQPLSLLESKGLEALNKAIVSGTVQR--ADGSIQNQSLHEALITRDRKQVFRIEDSIPV--LLPEEAIATIQIANFPDKLEH---HHHHH
General information:
TITO was launched using:
RESULT:
Template:
2K5R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80746 for 598 contacts (-135.0/contact) +
2D Compatibility (PS) -10011 + (NN) 1543 + (LL) 984
1D Compatibility (HY) 1600 + (ID) 700
Total energy: -87330.0 ( -146.04 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_2K5R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5R-query.scw
PDB file :
Tito_Scwrl_2K5R.pdb
: