Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLITTENKLAGSKKALEIIEKGITSGEVNTLGLATGSTPETLYAELVK----SDVDTKNVTTTNLDEYVGLAASDPNSYHYYMNDLLFSKKAFKES--FLPNGEATDAEAECARYEEIL-SEHPIDIQVLGIGTNGHIGFNEPGTSFDSITHKVVLTDSTREANKRFFEREEDVPTHAYSMGIKSIMNAKKIILLAFGENKAQAIKETIKGPVDVNCPASVLQNHPDVTVILDNEAASLL
2BKX Chain:B ((32-240))
-------------------------------LGLATGGTPEGTYRQLIRLHQTENLSFQNITTVNLDEYAGLSSDDPNSYHFYMNDRFFQHIDSKPSRHFIPNGNADDLEAECRRYEQLVDSLGDTDIQLLGIGRNGHIGFNEPGTSFKSRTHVVTLNEQTRQANARYFPSIDSVPKKALTMGIQTILSSKRILLLISGKSKAEAVRKLLEGNISEDFPASALHLHSDVTVLIDREAASL-
General information:
TITO was launched using:
RESULT:
Template:
2BKX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76127 for 1646 contacts (-46.2/contact) +
2D Compatibility (PS) -22148 + (NN) -13958 + (LL) 2476
1D Compatibility (HY) -17200 + (ID) 5500
Total energy: -132457.0 ( -80.47 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_2BKX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BKX-query.scw
PDB file :
Tito_Scwrl_2BKX.pdb
: