Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNCEKCNQNPATIQLYMNINGKRVEMPLCASCYAEVRNQANFGSNEFPGASGSPFDDIFRQLSGAANQANREQRSQANAQVQTQTAGGGNGILDEFGTNLTDMAKNEQLDPVIGRDKEIKRVIEILNRRNKNNPVLIGEPGVGKTAVVEGLANAIVAGDVPSKLMNKEVILLDVASLVSGTGIRGQFEERMKQLIKELQERKNTILFIDEVHTIVGAGSAEGSMDAGNILKPALARGDLQMIGATTLKEYRTIEKDAALERRFQPVTVSEPSTKETLTILNGLKPKYEDFHEVVYSPEALTAAVELSARYIQDRHLPDKAIDLMDEVGSKYNLSIEKLDENTVSERVARLEDEKNQALQMEDYEKAAKVRDEITRLEENKTSNSFSERPVIQASDIQAIIEEKTGIPVGRLQEDEQSKMKNLERNLTGKVIGQEDAVKKVAKAIRRSRVGLKSKNRPIGSFLFVGPTGVGKTELGRTLARELFGTSEAMIRLDMSEFMEKHSISKLIGSPPGYVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSNAGATDTEASVGFNTTTETKLEKGS-------DILAKLGAYFKPEFLNRLDSVIEFKSLEKDDLVQIIDLMLVDLNEMLAQEGVTIDVSKEVKEHLIDLGYDPKFGARPLRRTIQEHLEDTIADSLIDQPEAKNLVATLNDNKEITITEQVTA |
4FD2 Chain:D ((15-281)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDAIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLG----------SPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKIL-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FD2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135977 for 2010 contacts (-67.7/contact) +
2D Compatibility (PS) -28419 + (NN) -18865 + (LL) 30376
1D Compatibility (HY) -28000 + (ID) 7500
Total energy: -188385.0 ( -93.72 by residue)
QMean score : 0.584
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