Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVYATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATMLIVNGRLMLKREGRKLANMLPLIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGANE----------T--ISEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTALYYMPNALIREFIAITVMYKKVHMVLLGLLLLFFAFLAIIGVTFR |
| 3S06 Chain:A ((43-117)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------INQDMMLYIERIAKIIQKLP----KRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYG--------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24874 for 339 contacts (-73.4/contact) +
2D Compatibility (PS) -6692 + (NN) -5249 + (LL) 25852
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -14363.0 ( -42.37 by residue)
QMean score : 0.546
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