Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQKTFIKVTCSILTISDTRNLDTDTSGQLIQSALETAGHEVISRVVVPDD-VTLIKQKINELAANGSFCLITNGGTGIARRDVTYEALFATIQQEIPGFGEIFRMLSYE--EVGSRAMVSRAFAGFSESGLLLFALPGSSNACQLAVQKLIIPELPHLIAERQK
3IWT Chain:B ((39-173))
------------------------DESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSPTDITVETIRKLFDREIEGFSDVFRLVSFNDPEVKAAAYLTKASAGIIGKK-IVYLLPGSPDAVKLALKELILPEVGHLV-----
General information:
TITO was launched using:
RESULT:
Template:
3IWT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73516 for 1006 contacts (-73.1/contact) +
2D Compatibility (PS) -13743 + (NN) -3607 + (LL) 2684
1D Compatibility (HY) -15200 + (ID) 2400
Total energy: -105782.0 ( -105.15 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_3IWT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IWT-query.scw
PDB file :
Tito_Scwrl_3IWT.pdb
: