Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNLFQDDSLTLHTDLYQLNMMKAYFDDGLHERRSVFEVFFRDMPFD-SGFVVFAGLERIIHYMQNLRFTETDIAYLHD------ELGFDGPFLEYLRNFKFKGNILAAKEGEFVFK-TEPILQVEASLAEAQLIETALLNIVNFQ------------T---LIA-------TKAARIRSVIDDETFAEFGTRRAQEMDAA---IWGTRAAYIGGCDSTSNVRAGKIFGIPVSGTMAHAMVQAYRD------E-----LEAFRSYAKTHFDS--IFLVDTYDTLKSGVPNAIKVAKEMGDKINFIGIRLDSGDMAFLSKKARQMLDEAGF-TEAK-IFASSDLDEHTILSLKA--QKAKIDSWGVGTKLITAY-----DQPALGAVYKMAAIADENDILQDSIKLSSNTEKVSTPGKKKVYRIITNEDGLKAEGDYIALADESLENVDKLTMFHPVHTYIMKTVENFTARELLVPIFQNGELVYDMPSLDEIKAYKEENLALLWDEYKRTVRPEQYPVDLSVKCWKNKMRNIEKVRKSVQLHSPVELDMPF |
| 1YBE Chain:A ((22-421)) | -WKLDPIVRSLIDTDFYKLLMLQMIWKLYP-EVDATFSLINRTKTVRLAEEIDEMELREQLDHARTLRLSKKENIWLAGNTFYGRSQIFEPEFLSWLSSYQ-------LPEYELFKRDGQYELNFHGRWMDTTLWEIPALSIINELRSRSAMRSLGYFTLDVLYARAKAKMWEKVERLRE-LPGLRISDFGTRRRHSFLWQRWCVEALKEGIGPAFTGTSNVLLAMDSDLEAVGTNAHELPMVVAALAQTNEELAAAPYQVLKDWNRLYGGNLLIVLPDAFGTAAF-LRNAPEWV------ADWTGFRPDSAPPIEGGEKIIEWWRKMGRDPRTKMLIFSDGLDVDAIVDTYRHFEGRVRMSFGWGTNLTNDFAGCAP-LKPISIVCKVSDANGR-----PAVKLSDNPQKATGDPAE------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YBE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112419 for 2712 contacts (-41.5/contact) +
2D Compatibility (PS) -36064 + (NN) -9525 + (LL) 11588
1D Compatibility (HY) -14800 + (ID) 3700
Total energy: -164920.0 ( -60.81 by residue)
QMean score : 0.286
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