Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNPTKEEIQHILKKAKVIAVVGLSDKPDRTSYRVSQIMQQAGYKIIPVNPNADEILGEKTVKHLTDIEEHVDIVNVFRRSEFLPEIAEAFDQIDADVFWAQLGIANQEAFDFLTEKGYPTVMDYCIKVAYQEMD
3FF4 Chain:A ((3-119))
--------------AMKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVI-EGVDTVTLYINPQNQLSEYNYILSLKPKRVIFNPGTENEELEEILSENGIEPVIG-CTLVMLSA--
General information:
TITO was launched using:
RESULT:
Template:
3FF4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91466 for 906 contacts (-101.0/contact) +
2D Compatibility (PS) -12303 + (NN) 391 + (LL) 1572
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: -107456.0 ( -118.60 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_3FF4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FF4-query.scw
PDB file :
Tito_Scwrl_3FF4.pdb
: