Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKSNTFLLITILVGLVFISFGCSEEKETPKKTAKEVQGVQIKTKEFQRVVGWLSKDSVLLQTKKSGVTYFEELNIYNEKKRPIFNTKESISEVQISPDYRNILLYSAESAEKATMRIIALNDGSTVASR-A-TK-PLTTTFYWNDESPEKIMFVTYSPEWNFQIENWDYTLDQLDKID--VASPFISWYGDNLVISNNKDKPDDELGNLYLQDIRDSATKNLIV---ANIMQFAVHDNV-LLTIEKN-SDEKLLYDFRTLGFQNFFSYNAAREYDELGTFVPYFDTNFDKNTFLTFVPYKSAKIGS-GAKEYKLVKIDPTNKKESTILEL---M-DNQPILSYETGDLVLYGYLFDKVIDTKTGKMYNLINTPTKSF |
| 2OJH Chain:A ((21-290)) | -------------------------------------------------------------------RSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNSE-----GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAI-SDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIR--DQVFDIYSMDIDSGVE-TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS---SVERITDSA----YGDWFPHPSPSGDKVVFVSYDAD-VFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVR------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76158 for 2146 contacts (-35.5/contact) +
2D Compatibility (PS) -26921 + (NN) -6223 + (LL) 7320
1D Compatibility (HY) 400 + (ID) 1550
Total energy: -103132.0 ( -48.06 by residue)
QMean score : 0.327
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