Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRLGSHVSMSGKKMLLGASEEAASYGSNTFMIYTGAPQNTRRKPIEELNIEAGLEHMKAHDMADIVVHAPYI-INIGNSVKPETFELGVNFLQSEIERTRALGAKQIVLHPGAHVGE---GADKGIKQIIQGLNEALIH--DQDVQIALETMAGKGSECGRTFEELAQIIDGVTHNELLSVTFDTCHTHDAGYDIVNDFDGVLNQFDKIVGIDRLKVLHINDSKNERGAHKDRHANIGFGHIGFDALHYIVHHPQLADVPKILETPYVGGDKASKKAPYKWEIAMLKNGEFDPDLLNKIQNS |
| 3WQO Chain:A ((16-286)) | DMKFGVSSLVFLPESLTSSMEKIAEHNFDAWEIVCEGTH-----YLSPKNIKYLMELRDRYEV-EIVVHAPFSDLNPAS-MNERVRKLTVECIRDAIEGAFELDSEVVVVHPGYIPELWSNYVSEILDNNFSTLSEIVEIAEDYGIKIGLENMPNFRGVLGITPESLLEIVKDID-SKNLGITFDIGHANTAGNPA--EFVEKLQNIG-----IGIIHVHAHDNNG----YDDEHLKIGEGNINFIEVLEKLKEIGYDG-VISIENKNIRDA----VKSKEILKEYLEIVNEKVA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111559 for 2323 contacts (-48.0/contact) +
2D Compatibility (PS) -28827 + (NN) -12444 + (LL) 2164
1D Compatibility (HY) -11200 + (ID) 2800
Total energy: -164666.0 ( -70.89 by residue)
QMean score : 0.440
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