Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKENNFISLAKQAREFAYVPYSKFPVGAALVTKDDEVVLGCNIENASFGLTNCAERTAIFKAVSEGKRDFKQLVVVADTDGPVSPCGACRQVISEFCAPDMPVILTNLTGKTATVTVKELLPGAFTSEDML
1UWZ Chain:B ((1-130))
MNRQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAEATALFKAVSEGDTEFQMLAVAADTPGPVSPCGACRQVISELCTKDVIVVLTNLQGQIKEMTVEELLPGAFSSEDL-
General information:
TITO was launched using:
RESULT:
Template:
1UWZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76972 for 1048 contacts (-73.4/contact) +
2D Compatibility (PS) -14401 + (NN) -6803 + (LL) 176
1D Compatibility (HY) -14400 + (ID) 4100
Total energy: -116500.0 ( -111.16 by residue)
QMean score : 0.627
(partial model without unconserved sides chains):
PDB file :
Tito_1UWZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UWZ-query.scw
PDB file :
Tito_Scwrl_1UWZ.pdb
: