Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLEIDLLDETKNLLDEDKQLVENILQFAAEYLKIEQGTELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPD-EEKVMFGLQKEVLDAYGLER
1TVI Chain:A ((15-136))
--------------------ENLKEKLEEIVKK-EI-GDVHVNVILVSEDEIKELNQQFRGQDRPTDVLTFPLMEE-----------------DVYGEIYVCPLIVEENAREFNNTFEKELLEVVIHGILHLAGYDHEFEDKNSKEMFEKQKKYVEEVWGE-
General information:
TITO was launched using:
RESULT:
Template:
1TVI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34506 for 856 contacts (-40.3/contact) +
2D Compatibility (PS) -13007 + (NN) -6064 + (LL) 2328
1D Compatibility (HY) -8000 + (ID) 1850
Total energy: -61099.0 ( -71.38 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_1TVI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TVI-query.scw
PDB file :
Tito_Scwrl_1TVI.pdb
: