Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNNVLVTGGTGFLGMHIIFQLLQQGYQVKTTVRSLKSKEKVIEILQNNGITDFTHLSFVELDLSKDEGWKEAMLDCEYVLSVASPVFFGKFKNEEELISPAIEGITRILQAAKEAKVKRVVMTSNFGAIGF-SNADKNSITTEAYWTD-ELAKGL-SAYEKSKLIAEKEAWKFMENETELEFATINPVAIFGPSQSNHVSGSFDLLKNLLNGSMKRVINIPLNVVDARDVADLHIRAMITPEANGERFIASADGEISMADIAHLLQRERPELVDKMPKKTLPNAAIRAAALFSKHAKEGELMINMNRQISNSKARDVLGWKPISTKEEAVLAAVDSLAKYGLLD |
| 4R1S Chain:B ((13-270)) | ----VCVTGAGGFIASWLVKILLEKGYTVRGTVRN-PDDPKNGHLRELEGAKE--RLTLCKADLLDYQSLREAINGCDGVFHTASPVT----DDPEQMVEPAVIGTKNVINAAAEANVRRVVFTSSIGAVYMDPNRDPETVVDETCWSDPDFCKNTKNWYCYGKMVAEQAAWEEAK-EKGVDLVVINPVLVQGPLLQTTVNASVLHILKYLTGSAKTYANSVQAYVDVKDVALAHILLYETPEASG-RYLC-AESVLHRGDVVEILSKFFPE------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154022 for 2109 contacts (-73.0/contact) +
2D Compatibility (PS) -27803 + (NN) -12099 + (LL) 6240
1D Compatibility (HY) -16400 + (ID) 4350
Total energy: -208434.0 ( -98.83 by residue)
QMean score : 0.520
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