Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------MKNTKGKKITIIISIIILILVIATFSGYYYVKSQLEPKDEASKEKITVEIPAGSSISDISTILEDKKVINNASIFSFYV-------KYNNDTNL----KAGNYELSPAMNTD-QIVKKMQEGKTVAPAKLVIPEGYTLDQIADRIVAYQPKLK---------KADVLKTMDDPEFVASMIKA--YPETVTNDVLNKSIKHPLEGYLYPATYT---------------FKGTDVSAEQIITEMVKATDVNIAKYRDELTKQKMSVHKFLT--MSSIIEKEATENVDRKMIASVFYNR-LAKDMRLQT--------DPTVLYALGEHKSKTTYKDLEVDSPYNTYKNNGLPPGPISNSGDSSMEAALYPEKSDYLYFLANTKTGKVYFSKTLEEHNKLKEEHITKNN |
| 4CZB Chain:A ((1-415)) | MELMMAIGYLGLALVLGSLVAKIAEKLKIPDIPLLLLLGLIIGPFLQIIPSDSAMEIFEYAGPIGLIFILLGGAFTMRISLLKRVIKTVVRLDTITFLITLLISGFIFNMVLNLPYTSPVGYLFGAITAATDPATLIPVFSRVRTNPEVAITLEAESIFNDPLGIVSTSVILGLFGLFSSSNPLIDLITLAGGAIVVGLLLAKIYEKIIIHCDFHEYVAPLVLGGAMLLLYVGDDLLPSICGYGFSGYMAVAIMGLYLGDALFRADDIDYKYIVSFCDDLSLLARVFIFVFLGACIKLSMLENYFIPGLLVALGSIFLARPLGVFLGLIGSKHSFKEKLYFALEGPRGVVPAALAVTVGIEILKNADKIPASITK----------YITPTDIAGTIIIGTFMTILLSVILEASWAGMLALKLLGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CZB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 38662 for 2940 contacts (13.2/contact) +
2D Compatibility (PS) -35410 + (NN) -2102 + (LL) 444
1D Compatibility (HY) -17600 + (ID) 2800
Total energy: -18806.0 ( -6.40 by residue)
QMean score : 0.107
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