Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLTKIEIITRPNRFHLFQKELAKIGVSGLTVTKALGTGLEKGFIELYRGTK-KESNIHERMKIEIVVSTVPVEDVLRVVKETLRTGEPGDGKVFIYPLAEVVKISTGETGIDALQDKPSK
4USI Chain:B ((20-124))
-----RIEAIFRPWRLPFVIDTLSKYGIRGLTNTPVKGVGVQGGS--------FGPSNLVDKEKLDIVVSRAQVDAVVRLVAASAYTGEIGDGKIFVHPVAEVVRIRTAE------------
General information:
TITO was launched using:
RESULT:
Template:
4USI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44249 for 585 contacts (-75.6/contact) +
2D Compatibility (PS) -10895 + (NN) -7032 + (LL) 1188
1D Compatibility (HY) -7600 + (ID) 2150
Total energy: -70738.0 ( -120.92 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_4USI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4USI-query.scw
PDB file :
Tito_Scwrl_4USI.pdb
: