Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKTPFIISGIGLLGFIFFMTGVMTGAKWIQRFDHYWNSVIRVGITDTKTTVISYLTDIGGVATICILTAIIIIVFVFMRKVDTAIWFGSIVLIGGALIPSIIKNIVQRPRPTYKL---------------------------IEQGGFSFPSGHSTGSTVFYGMLAFLLILYVSR------S--------------------------------------WLRFTIGILALGIVIFVMYSRVYLGVHFPSDVVAGFLIGNAALFSGIGCYFIWNEKLALWANKFKKA |
3BB0 Chain:A ((340-513)) | -----------------------------------------------------------------------------------------VACT-DAGIFSWKEKWEFEFWRPLSGVRDDGRPDHGDPFWLTLGAPATNTNDIPFKPPFPAYPSGHATFGGAVFQMVRRYYNGRVGTWKDDEPDNIAIDMMISEELNGVNRDLRQPYDPTAPIEDQPGIVRTRIVR-HFDSAWELMFENAISRIFLGVHWRFDAAAARDILIPTTT----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39848 for 651 contacts (-61.2/contact) +
2D Compatibility (PS) -9898 + (NN) 5201 + (LL) 9876
1D Compatibility (HY) 0 + (ID) 1000
Total energy: -35669.0 ( -54.79 by residue)
QMean score : -0.054
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