Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKIYKALGWFFKENWKSYAFGVTILFTIALLQLVPPQIIGYTVDAVTNDSLTKDKLIKWMIILVVAAILAYG-GRYVWRMLIFGSDNKLQRTLRLRLFEHFTKMSPFFFQRYRTGDLMAHATNDITAIQQVAGIGVLTLSDSVLTGGTVIA--TMAITIDWRLTLIALLPMPFMVLGSSILGKKLHDRFHGAQAAFSMLNDKTQESISGIKVTRTFGQEKEDIQDFAKQTKEVVQKNISVAKVDAMFDPMISIIVGVSFVLSLGFGAKF--VVDGELTIGQVIAFSNYLFLLIWPMLAFGFLYNIIQRGNASYDRVQHLLAEKEDVLDQEGALDTVPVGDLQVTMDKFTYPDESEPVLADIHFNLKAGETLGIVGRTGSGKTSLLKLLMREYDTYEGKIAFANVKIQDYTVRALREAIGYVPQDQFLFSTTVRDNIRFGKPDA-PQEEVTKIAKLVSVDEDILGFENGYDTIVGERGVSLSGGQKQRLAIARALIMNPELLILDDALSAVDAKTEEQILANLKENRSDKTTIISAHRLSSVEHANLIIVIDKGRIVERGTHMELMALDGWYAEMFREQQLEEALEEGGVADGSDE |
| 3B60 Chain:D ((59-579)) | ---------------------------------------------------TDRSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDS---EQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVL-YAASFPSVMD-SLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRVIDRA-TGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQHGVYAQLHKMQ----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193828 for 3897 contacts (-49.7/contact) +
2D Compatibility (PS) -54552 + (NN) -17804 + (LL) 5048
1D Compatibility (HY) -36400 + (ID) 8200
Total energy: -305736.0 ( -78.45 by residue)
QMean score : 0.274
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