Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGEKMAIWRTKKPATKQKIVSDLQELGIKKGDTIIFHASMSKAHWICGGPVTVILALQELVGELGNIVMPAQTGQLSDPAKWENPPVPESWWKIIRRETPPFDPLVTPT-RGMGVIAETFRTMPDVERSFHPYHSFCAWGKDKKQILANQPLAKSMGDESPLGKMYQLDAKIILFGVDNNNNTSLHLAEERSNAFPLIENQAAFLKNGEIIWEKYQEIDYNSEVFIALGRAYEKEHDFHPTTIIGAPTKIYDMRDLVDFGTKYFQTKNH |
2NYG Chain:C ((3-263)) | ---KKIVESTTFPRTKQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTIVMPSQSVELSDPKEWGNPPVPEEWWDIIRESMPAYNSNYTPTTRGMGQIVELFRSYPEVKRSNHPNYSFVAWGKHKNKILNQHPLEFGLGEQSPLGKLYIRESYVLLLGADFDSSTCFHLAEYRIPYQKIINRGAPIIVEGKRVWKEYKELEFREELFQEVGQAFEAEHNMKVGKVGSANCRLFSLTEAVDFAEKWF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NYG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103150 for 2163 contacts (-47.7/contact) +
2D Compatibility (PS) -27552 + (NN) -8650 + (LL) 340
1D Compatibility (HY) -22000 + (ID) 5700
Total energy: -166712.0 ( -77.07 by residue)
QMean score : 0.467
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