Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEELILSIVKPLVDHPEDVVITPEETDTSLTYKLSVSKEDMGRVIGKQGRIAKAIRTLVYAVGSKNDKKIRLEIIE
3KRM Chain:A ((86-116))
------------------------------ETHIRVPASAAGRVIGKGGKTVNELQNLTAA---------------
General information:
TITO was launched using:
RESULT:
Template:
3KRM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5457 for 127 contacts (-43.0/contact) +
2D Compatibility (PS) -3393 + (NN) -527 + (LL) 3496
1D Compatibility (HY) -400 + (ID) 500
Total energy: -6781.0 ( -53.39 by residue)
QMean score : 0.226
(partial model without unconserved sides chains):
PDB file :
Tito_3KRM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KRM-query.scw
PDB file :
Tito_Scwrl_3KRM.pdb
: