Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNDVFLKALPVLQKLTTAGF------------EAYFVGGSVRDYLLNRTISDVDIATSAFPEEVKEIFQST-----YDTGIAHGTVTVRENNEFYEVTTFRTEGTYEDFRRPSEVKFIRSLEEDLQRRDFTMNAIAMDEHFALHDPFSGQEAIKNKAIKAVGKASERFHEDALRMMRGVRFLSQL---DFQLDSETEKALESQIGLLQHTSVERITVEWLKMIKGPAIRRAMDLLLKVEMETYLPGLKGEKKALTEFGSWDWGKRTTDDAIWLGLVVTVQPNNVNAFLKAWKLPNKTIQLVSKAYQYALKMKETWLAEELYHAGKAVFSLVNELNIIRGKENNQHKLSQAYEALPIHSKKDLAITGADLLKWSGESAGPWVKETLDKLECGVLCNEINNEKNQIKRWLGYHEE |
4X4W Chain:B ((9-244)) | ---------PEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQMKEMFQSAGIRMIN------GTITARLHEENFEITTLRIDVTTD-----AEVEFTTDWQKDAERRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLDVAPYI------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85778 for 1498 contacts (-57.3/contact) +
2D Compatibility (PS) -21891 + (NN) -7379 + (LL) 12820
1D Compatibility (HY) -13200 + (ID) 3800
Total energy: -119228.0 ( -79.59 by residue)
QMean score : 0.595
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