Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKERVIIVGSGISGCTAALRLMQDYDVTIITKGYKEESNSMLAQGGVAAAVSKNDTPKKHFSDTFQAGCFHNKVLAVNQLVTHGPMVIQKLIAEGMAFDEQDGELALGLEGAHQLPRILHTGGDQTGKFLTTFLQEKL---TDIHWQEQKMAIEIIKQND-------SAIGVHCLDKENR-LHTYYGEHIILASGGLGQLFPVTTNAATISGDGLALAYRAGAKLTDMEFIQFHPTLLFLNGRCHGLISEAVRGEGAKLIRADGSAIMTDVHPRADLAPRDIVAATLFAEIQD--GNEVFLDITAIPN--FEKRFPGITANLDAHHIPFRETKRIPVHPGAHFLMGGIRTDLSGKTNIPGLYAIGEVANAGVHGANRLASNSLLETLVFGEKVAEYIRTQKINPIDHPEIPLSNQIQTPHLPDKQLLQEK-------IWETLGITRKPEKITEFLHWLTDF-----DYANHTRKTA---EISHMLITAKLIAESALKRTESLGAHRILKGVIK |
| 1CHU Chain:A ((11-517)) | -----VLIIGSGAAGLSLALRLADQHQVIVLSKGPVTE-------------FDETDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGVL----------------------------------TTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDLTQ-EPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRM---HDISTLPPWDESRVENPDERVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRITMLQQEIDEYYAHFRVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFTL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CHU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259816 for 3627 contacts (-71.6/contact) +
2D Compatibility (PS) -44355 + (NN) -4207 + (LL) 3352
1D Compatibility (HY) -27200 + (ID) 7600
Total energy: -339826.0 ( -93.69 by residue)
QMean score : 0.501
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