Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVIVACGSGVATSQTVASKVERILKEKGVRATVEAVDIKSLEQHIKTSDVYVAITKANKEF--------DIPTLNGIAFLT-GMGMDEETEKLLNALK
1E2B Chain:A ((3-100))
KKHIYLFSSAGMSTS-LLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAI-
General information:
TITO was launched using:
RESULT:
Template:
1E2B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46547 for 718 contacts (-64.8/contact) +
2D Compatibility (PS) -9620 + (NN) -3024 + (LL) 184
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -61707.0 ( -85.94 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_1E2B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E2B-query.scw
PDB file :
Tito_Scwrl_1E2B.pdb
: