Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWRLTGNSSLPIYLQIVDLIETKIMNGELLPEEKLPPERQLAEMFGVNRSTVVRALDELTARAVIIRKQGSGTTVNAEKWGLFAGQSTNWRHYLTQGGFTPAVPYIRQAGVMERANSDNVIDAASGELPLEMTPKMETPSLSWQSFIAEEQQEDEAGYKPLRETIQKQMKEAYGLQTRSEQIFITSGAQQALFLITQCLLKPGDAVAIESPSYFYSLSLFQSAGLRIFALPMDEDGVVIS----ELRDLYHK-HRVKMVFVNPTFQNPTGLVMSLKRRKELVKICAHLQIPIVEDDPFSELGALDNQIPAPLKRLDTDN-VLYIGSLSKIMGSTTRIGWLIGPTAVIERLALARQEMDFGLSIFPQVLANSVLNTAGYKAHLLQLHHVLEQRRDDLIEAFEAILPSEVTFIKPKGGFHLWVKLPVEFRSVRDFDIFLANDLLVMPGFLFGVKEAV-----IRVTYARLEK--KEARRVAEIIKQILVSKKCEEA |
| 3ATH Chain:C ((119-446)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------GFTPLRETLMKWLGKRYGI-SQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNP-EKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGIDSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEEL-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ATH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -212693 for 2660 contacts (-80.0/contact) +
2D Compatibility (PS) -35348 + (NN) -25397 + (LL) 11984
1D Compatibility (HY) -29600 + (ID) 5550
Total energy: -296604.0 ( -111.51 by residue)
QMean score : 0.529
|
|
|