Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETVLQAKNVRKIYGSKGNVYTALENISIDIKEGEFTGIMGPSGAGKSTLLNVLSTIDKPTSGQIVISGQELENMNEQQMSTFRRDKLGFIFQDYNLLDTLTIRENIILPLALAKRPVKEMEEKLAIISEKFGITEILDKYPSEISGGQKQRTAASRAIITSPSLIFADEPTGALDSKSATNLLESLRDLNEQDKSTIMMVTHDAFAASFCKRILFIKDGELYTEIYRGTKTRKEFFQKILDVLAKLGGDSDDVI
2PCJ Chain:B ((2-223))-AEILRAENIKKVIRG----YEILKGISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEGKEVDYTNEKELSLLRNRKLGFVFQFHYLIPELTALENVIVPMLKMGKPKKEAKERGEYLLSELGLGDKLSRKPYELSGGEQQRVAIARALANEPILLFADEPTGNLDSANTKRVMDIFLKINEGG-TSIVMVTHERELAELTHRTLEMKDGKVVGEITR---------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104426 for 1808 contacts (-57.8/contact) +
2D Compatibility (PS) -24358 + (NN) -10006 + (LL) 1840
1D Compatibility (HY) -18000 + (ID) 4500
Total energy: -159450.0 ( -88.19 by residue)
QMean score : 0.479

(partial model without unconserved sides chains):
PDB file : Tito_2PCJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PCJ-query.scw
PDB file : Tito_Scwrl_2PCJ.pdb: