Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRVTVWNEFLHEKEDDAVLAIYPDGIHGQIASFLEKAGIEAGTATLEEPEHGL--TEEVLANTDVLIWWGHMGHDR------------VEDKIVDRVQKRVLEGMGLVVLHSGHM-----------SKIFMRLMGTSCDLKWRE----ANERERLWVVDPTHPIAKGIGEFIELDEEEMYGEHFDIPTPDELIFLGWFEGGEVFRSGITYKRGNGRIFYFQPGHES-YP---TYHHPDIQQVIINGVHWCAEGRKNYPAYGNHQPLEKIGRK |
| 2GK3 Chain:A ((43-255)) | ----------------------------TWLLECLRKGGVDIDYMPAHTVQIAFPESIDELNRYDVIVISDI-GSNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLMIGGYLSFMGIEAKANYKNTVLAEVLPVI--MLDGDDRVEKPEGICAEAVSPEHPVVNGFSD-YPVF-LGYNQ--AV-ARDDADVVLTI--N--NDPLLVFGEYQQGKTACFMSDCSPHWGTQQFMSWPFYTDLWVNTLQFIAR-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GK3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90046 for 1383 contacts (-65.1/contact) +
2D Compatibility (PS) -19509 + (NN) -5992 + (LL) 3616
1D Compatibility (HY) -10000 + (ID) 1200
Total energy: -123131.0 ( -89.03 by residue)
QMean score : 0.417
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