Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKMAVISLVLLLFLVGCGKEEAAQKPEQKTDKEPKIVATTVAITEIMDKLDL--PLVGIPSSSKKLPKRYADVKETGSPMGPDLEIIRMLKPDMVLSTKTL-EADLKSGFEGADLEADFLDF--TSIASMQTEIKNLGAKFDRIEEATKLNKDLTSDIDQVKSNVAK-KKKPTVLILMGVPG-SYLVVTEHAYIGDLVKLAGGENVIKDQKVEYLASNTEYLQSANPDIILRAAHGMPAEVVKMFDEEFKTNDIWKHFDAVKNNRVYDLDENLFGMTASLNAPEALKEMEKMLYDN |
| 2R7A Chain:A ((2-256)) | ---------------------------------AERIVVAGGSLTELIYAMGAGERVVGVDETTS-YPPETAKLPHIGYWKQLSSEGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAKTLQVPEQGDALVTQINQRLERVQQNVAAKKAPVKAMFILSAGGSAPQVAGKGSVADAILSLAGAENVATH--QQYKSYSAESLIAANPEVIVVTSQMVDG-----DINRLRSIAGITHTAAWKNQRIITVDQNLI-LGMGPRIADVVESLHQQLWPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R7A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130657 for 2043 contacts (-64.0/contact) +
2D Compatibility (PS) -26979 + (NN) -15939 + (LL) 3968
1D Compatibility (HY) -12400 + (ID) 2500
Total energy: -184507.0 ( -90.31 by residue)
QMean score : 0.604
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