Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSDIIVADFWKNNEEILTDFDKDSFCESWTENEMWSIEFKVAQTPKNAHCYSFLDYESSVYFRGQEF-----VVKQL--SHDAVGKTLSKDIRAPHIYYTCQDGRQDDAITGSFTLEQCLTHIFKTDNRGFSWEIIDPSNILEKVQQENFGNNNYLTLIDQLLDDYGVVVIPDNRHLVFKPREIYGAKTENFIRYKYNTDEASFDIDTLSLKTKIKGYGKVDSNGNNYFSPITYTSPEVEKWGIRWQEPVSDERYTVAGNMQRRLKLELQDYPATTGSVILKNDYECEKGDYVLFIYEPLGIDYDVQIVAYKKYPFTIKAPEITLSNNKKSIVSIMAQLAKVLKGAK |
4IWX Chain:A ((19-312)) | SHMKIAIL----SRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPA-------ASSIHYKGRKLPHFDAVIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLRSMQLLARQGIDLPVTGIAHSPDDTSDLIDMV-----GGAPLVVKLVEGTQGIGVVLAETRQAAESVIDAFRGLNA-HILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNL-------HRGGAASVASITPQEREIAIKAARTMALD------VAGVDILRAN----RGPLVMEVNASPGL------------------EGIEKTTGIDIAGKMIRWIERHATT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IWX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16492 for 2305 contacts (-7.2/contact) +
2D Compatibility (PS) -29681 + (NN) 662 + (LL) 3984
1D Compatibility (HY) -3200 + (ID) 1750
Total energy: -46477.0 ( -20.16 by residue)
QMean score : 0.249
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