Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPKDLLYTEEHEWV------KADDGSYVIGITDFAQDQLGDIVFVELPEVGDTVTKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILKLEEVEEADVKALLSSDDYEKVLD
3TZU Chain:D ((10-130))
--IPGDRSYTADHEWIDIAPGAATPDGPVRVGITSVAVEALGDLVFVQLPEVGETVSAGESCGEVESTKTVSDLIAPASGQIVEVNTAAVDDPATIATDPYGAGW---LYSVQPTAVGELLTASEY-----
General information:
TITO was launched using:
RESULT:
Template:
3TZU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23948 for 884 contacts (-27.1/contact) +
2D Compatibility (PS) -12248 + (NN) -4299 + (LL) 1084
1D Compatibility (HY) -10400 + (ID) 2750
Total energy: -52561.0 ( -59.46 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_3TZU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TZU-query.scw
PDB file :
Tito_Scwrl_3TZU.pdb
: