Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRVIDTHCDALYKLQAGKGKYTF---Q--DAEELDVNFERLIEAKMLLQGFAIFLDEDI-PV---EHKWKKAVEQVNIFKQHVLHKGGIIHHVKKWCDLENLP-EDKIGAMLTLEGIEPIGRDLDKLTQLLDGGVLSVGLTWNNANLAADGIME---ERGAGLTRFGKDIIHLLNERKVFTDVSHLSVKAFWETLEQAEFV-IASHSSAKAICAHPRNLDDEQIKAMIEHDAMIHVIFHPLFTTNDG---------------------------------VADIEDVIRHIDHICELGGMKNIGFGSDFDGIPDHVKGLEHAGKYQNFLETLG-KHYTKEEVEGFASRNFLNHLPK
2RAG Chain:A ((47-407))FLTLDTHLDTPAHFGRP--GWDIADHHEVEHDFSQVDLPRMNQGGLDGGFFVVYIGQGELTEKGYTYARDYALHRTIEIREMLAANPDTFEMALTSDDARRIAKAGKKFAFVSMENSWPVGEDLSLVETFYKEGLRMAGPVHFRNNQLADSSTDPKGKIWNGYSPLGLRWLAEANRLGIVIDVSHASDDVVDQSVALSKAPIIASHSGPKAVYDHPRNLDDARLKKIADAGGAICINSI--YLTDTTPSPEAPDMKTATPEAVKAYADKRAAIDKAHPAARGDFDLYMKSMLHVLKVAGPKGVCVGADWDGGGG-MDGFEDITDLPKITARLKAEGYSDADIEAIWSGNVLRIVDA


General information:
TITO was launched using:
RESULT:

Template: 2RAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -191426 for 2759 contacts (-69.4/contact) +
2D Compatibility (PS) -32242 + (NN) -11892 + (LL) -28
1D Compatibility (HY) -10000 + (ID) 3100
Total energy: -248688.0 ( -90.14 by residue)
QMean score : 0.472

(partial model without unconserved sides chains):
PDB file : Tito_2RAG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2RAG-query.scw
PDB file : Tito_Scwrl_2RAG.pdb: