Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VIFIEVMKERFGEFE--GETVWKWTMINDHDMRMSVLNYGAIVTSLETKDKFGDFANISLGFTNLDDYLAHSPYFGATLGPVAGRITNGQFSLDGKQFQLIQNEGSNHRHGGKFNFSKKLWDVSVEKSLDQIVMTFEYCWADGENGYPGKIDAKMTYTLNNKNEWLVDYEARSNQPTIYNPSNHIYFNLSGEAGSTVLQHQLWVNSDSFLPIDEEFLPIGEKRLAENTIFDLRAGREVAEITQSQDQQVKLVGAGLDHTFILKHENGRP-DAVLFDPKSGRRLEMETKADSVLIYTANSLDGSFEIDERAV-PKYAGITMETQGLVDAINHEGFGDIVLRPEKPFTSRTAFRFTVES |
1SO0 Chain:B ((6-343)) | -----VTRAVFGELPSGGGTVEKFQLQSDL-LRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIGRVANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLSNGVQ----FSRISPDGEEGYPGELKVWVTYTLDG-GELIVNYRAQASQATPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGK--HLQDFHLN----GFDHNFCLKGSKEKHFCARVHHAASGRVLEVYTTQPGVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQNWPDAVNQPRFPPVLLRPGEEYDHTTWFKFSV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SO0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92676 for 2930 contacts (-31.6/contact) +
2D Compatibility (PS) -35636 + (NN) -7381 + (LL) 2152
1D Compatibility (HY) -23600 + (ID) 6650
Total energy: -163791.0 ( -55.90 by residue)
QMean score : 0.440
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